Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.8
SMARCA2P51531 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
SMARCA2P51531 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC32.51■■■□□ 2.79
SMARCA2P51531 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
SMARCA2P51531 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.79
SMARCA2P51531 COX5A-206ENST00000568783 571 ntTSL 3 BASIC32.51■■■□□ 2.79
SMARCA2P51531 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.79
SMARCA2P51531 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC32.51■■■□□ 2.79
SMARCA2P51531 AC079776.2-201ENST00000641154 1609 ntBASIC32.51■■■□□ 2.79
SMARCA2P51531 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC32.51■■■□□ 2.79
SMARCA2P51531 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
SMARCA2P51531 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
SMARCA2P51531 AP000867.4-201ENST00000641616 219 ntBASIC32.5■■■□□ 2.79
SMARCA2P51531 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC32.5■■■□□ 2.79
SMARCA2P51531 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC32.5■■■□□ 2.79
SMARCA2P51531 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SMARCA2P51531 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC32.5■■■□□ 2.79
SMARCA2P51531 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC32.49■■■□□ 2.79
SMARCA2P51531 AC108751.1-201ENST00000490852 363 ntBASIC32.49■■■□□ 2.79
SMARCA2P51531 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
SMARCA2P51531 MSRA-206ENST00000521209 814 ntTSL 3 BASIC32.49■■■□□ 2.79
SMARCA2P51531 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC32.49■■■□□ 2.79
SMARCA2P51531 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
SMARCA2P51531 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
SMARCA2P51531 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
SMARCA2P51531 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC32.49■■■□□ 2.79
SMARCA2P51531 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC32.49■■■□□ 2.79
SMARCA2P51531 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC32.49■■■□□ 2.79
SMARCA2P51531 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC32.49■■■□□ 2.79
SMARCA2P51531 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC32.49■■■□□ 2.79
SMARCA2P51531 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
SMARCA2P51531 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC32.49■■■□□ 2.79
SMARCA2P51531 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC32.49■■■□□ 2.79
SMARCA2P51531 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC32.48■■■□□ 2.79
SMARCA2P51531 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC32.48■■■□□ 2.79
SMARCA2P51531 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
SMARCA2P51531 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
SMARCA2P51531 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
SMARCA2P51531 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
SMARCA2P51531 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC32.48■■■□□ 2.79
SMARCA2P51531 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
SMARCA2P51531 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
SMARCA2P51531 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC32.48■■■□□ 2.79
SMARCA2P51531 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC32.48■■■□□ 2.79
SMARCA2P51531 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC32.48■■■□□ 2.79
SMARCA2P51531 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC32.47■■■□□ 2.79
SMARCA2P51531 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
SMARCA2P51531 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
SMARCA2P51531 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC32.47■■■□□ 2.79
SMARCA2P51531 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC32.47■■■□□ 2.79
SMARCA2P51531 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC32.47■■■□□ 2.79
SMARCA2P51531 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
SMARCA2P51531 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
SMARCA2P51531 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SMARCA2P51531 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC32.47■■■□□ 2.79
SMARCA2P51531 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC32.47■■■□□ 2.79
SMARCA2P51531 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC32.47■■■□□ 2.79
SMARCA2P51531 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SMARCA2P51531 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SMARCA2P51531 KRT18P65-201ENST00000439811 1286 ntBASIC32.46■■■□□ 2.79
SMARCA2P51531 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC32.46■■■□□ 2.79
SMARCA2P51531 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC32.46■■■□□ 2.79
SMARCA2P51531 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SMARCA2P51531 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC32.46■■■□□ 2.79
SMARCA2P51531 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SMARCA2P51531 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SMARCA2P51531 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SMARCA2P51531 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
SMARCA2P51531 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
SMARCA2P51531 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC32.45■■■□□ 2.79
SMARCA2P51531 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC32.45■■■□□ 2.79
SMARCA2P51531 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC32.45■■■□□ 2.79
SMARCA2P51531 ORC5-208ENST00000626700 344 ntTSL 3 BASIC32.45■■■□□ 2.79
SMARCA2P51531 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
SMARCA2P51531 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
SMARCA2P51531 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC32.45■■■□□ 2.79
SMARCA2P51531 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC32.45■■■□□ 2.79
SMARCA2P51531 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
SMARCA2P51531 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
SMARCA2P51531 PON3-203ENST00000427422 894 ntTSL 3 BASIC32.45■■■□□ 2.78
SMARCA2P51531 SDCCAG3P1-201ENST00000589292 1150 ntBASIC32.45■■■□□ 2.78
SMARCA2P51531 AC006557.2-201ENST00000592985 1240 ntBASIC32.45■■■□□ 2.78
SMARCA2P51531 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC32.44■■■□□ 2.78
SMARCA2P51531 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC32.44■■■□□ 2.78
SMARCA2P51531 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC32.44■■■□□ 2.78
SMARCA2P51531 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SMARCA2P51531 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
SMARCA2P51531 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC32.44■■■□□ 2.78
SMARCA2P51531 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
SMARCA2P51531 PNMT-202ENST00000394246 821 ntTSL 2 BASIC32.44■■■□□ 2.78
SMARCA2P51531 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC32.44■■■□□ 2.78
SMARCA2P51531 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
SMARCA2P51531 AL596442.2-201ENST00000610240 980 ntBASIC32.44■■■□□ 2.78
SMARCA2P51531 PGM5P2-202ENST00000637225 1043 ntBASIC32.44■■■□□ 2.78
SMARCA2P51531 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
SMARCA2P51531 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SMARCA2P51531 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC32.44■■■□□ 2.78
SMARCA2P51531 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SMARCA2P51531 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC32.43■■■□□ 2.78
SMARCA2P51531 SDHAP2-201ENST00000455183 2001 ntBASIC32.43■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms