Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.84■□□□□ 0.45
KRT6CP48668 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT6CP48668 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.84■□□□□ 0.45
KRT6CP48668 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.84■□□□□ 0.45
KRT6CP48668 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
KRT6CP48668 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
KRT6CP48668 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT6CP48668 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KRT6CP48668 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT6CP48668 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT6CP48668 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.83■□□□□ 0.45
KRT6CP48668 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.83■□□□□ 0.45
KRT6CP48668 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
KRT6CP48668 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT6CP48668 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KRT6CP48668 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.83■□□□□ 0.45
KRT6CP48668 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.83■□□□□ 0.45
KRT6CP48668 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
KRT6CP48668 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KRT6CP48668 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KRT6CP48668 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT6CP48668 NOC2LP2-201ENST00000407594 1944 ntBASIC17.83■□□□□ 0.44
KRT6CP48668 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6CP48668 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT6CP48668 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6CP48668 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6CP48668 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6CP48668 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.83■□□□□ 0.44
KRT6CP48668 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT6CP48668 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.83■□□□□ 0.44
KRT6CP48668 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6CP48668 AC093677.2-201ENST00000600169 1863 ntBASIC17.83■□□□□ 0.44
KRT6CP48668 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT6CP48668 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6CP48668 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT6CP48668 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT6CP48668 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6CP48668 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
KRT6CP48668 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6CP48668 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6CP48668 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6CP48668 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6CP48668 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6CP48668 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT6CP48668 KRT8P50-201ENST00000562022 1438 ntBASIC17.82■□□□□ 0.44
KRT6CP48668 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
KRT6CP48668 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT6CP48668 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6CP48668 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6CP48668 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT6CP48668 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT6CP48668 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6CP48668 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6CP48668 UNC93B2-201ENST00000285383 730 ntBASIC17.82■□□□□ 0.44
KRT6CP48668 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6CP48668 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT6CP48668 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6CP48668 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6CP48668 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT6CP48668 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
KRT6CP48668 SLC25A1P2-201ENST00000430693 912 ntBASIC17.82■□□□□ 0.44
KRT6CP48668 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT6CP48668 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.82■□□□□ 0.44
KRT6CP48668 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT6CP48668 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT6CP48668 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6CP48668 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT6CP48668 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
KRT6CP48668 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6CP48668 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT6CP48668 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT6CP48668 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
KRT6CP48668 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6CP48668 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6CP48668 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6CP48668 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT6CP48668 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6CP48668 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT6CP48668 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6CP48668 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6CP48668 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT6CP48668 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6CP48668 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT6CP48668 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
KRT6CP48668 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6CP48668 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6CP48668 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.81■□□□□ 0.44
KRT6CP48668 TSPY17P-201ENST00000450329 467 ntBASIC17.81■□□□□ 0.44
KRT6CP48668 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
KRT6CP48668 AC008550.1-201ENST00000511500 884 ntBASIC17.81■□□□□ 0.44
KRT6CP48668 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
KRT6CP48668 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT6CP48668 MIR4785-201ENST00000585005 73 ntBASIC17.81■□□□□ 0.44
KRT6CP48668 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6CP48668 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6CP48668 AC005332.8-201ENST00000622750 2735 ntBASIC17.81■□□□□ 0.44
KRT6CP48668 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT6CP48668 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6CP48668 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6CP48668 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms