Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXA11P31270 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA11P31270 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA11P31270 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA11P31270 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA11P31270 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HOXA11P31270 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HOXA11P31270 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA11P31270 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA11P31270 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXA11P31270 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.82■□□□□ 0.76
HOXA11P31270 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA11P31270 AC099336.1-202ENST00000602961 463 ntBASIC19.82■□□□□ 0.76
HOXA11P31270 AL121772.3-201ENST00000610840 674 ntBASIC19.82■□□□□ 0.76
HOXA11P31270 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA11P31270 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA11P31270 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HOXA11P31270 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA11P31270 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA11P31270 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA11P31270 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA11P31270 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HOXA11P31270 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXA11P31270 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 LINC00602-201ENST00000629776 2065 ntBASIC19.81■□□□□ 0.76
HOXA11P31270 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXA11P31270 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
HOXA11P31270 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
HOXA11P31270 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.81■□□□□ 0.76
HOXA11P31270 TSPY12P-201ENST00000421279 868 ntBASIC19.81■□□□□ 0.76
HOXA11P31270 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXA11P31270 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
HOXA11P31270 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXA11P31270 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 AC138894.3-201ENST00000603787 634 ntBASIC19.81■□□□□ 0.76
HOXA11P31270 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.81■□□□□ 0.76
HOXA11P31270 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXA11P31270 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
HOXA11P31270 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXA11P31270 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA11P31270 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXA11P31270 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA11P31270 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA11P31270 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA11P31270 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA11P31270 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA11P31270 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HOXA11P31270 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA11P31270 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA11P31270 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA11P31270 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXA11P31270 EMBP1-201ENST00000458200 901 ntBASIC19.8■□□□□ 0.76
HOXA11P31270 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
HOXA11P31270 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXA11P31270 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA11P31270 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA11P31270 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA11P31270 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXA11P31270 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXA11P31270 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HOXA11P31270 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA11P31270 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA11P31270 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA11P31270 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA11P31270 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA11P31270 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
HOXA11P31270 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA11P31270 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA11P31270 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA11P31270 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXA11P31270 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA11P31270 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXA11P31270 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA11P31270 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA11P31270 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXA11P31270 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HOXA11P31270 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA11P31270 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.79■□□□□ 0.76
HOXA11P31270 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXA11P31270 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXA11P31270 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.79■□□□□ 0.76
HOXA11P31270 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXA11P31270 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA11P31270 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXA11P31270 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA11P31270 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms