Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ERCC2P18074 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC2P18074 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC2P18074 RCN1P1-201ENST00000400413 996 ntBASIC18.92■□□□□ 0.62
ERCC2P18074 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.92■□□□□ 0.62
ERCC2P18074 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.92■□□□□ 0.62
ERCC2P18074 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.92■□□□□ 0.62
ERCC2P18074 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.92■□□□□ 0.62
ERCC2P18074 AC006011.2-201ENST00000621313 1158 ntBASIC18.92■□□□□ 0.62
ERCC2P18074 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC2P18074 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC2P18074 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.92■□□□□ 0.62
ERCC2P18074 GMCL1P1-201ENST00000463439 1581 ntBASIC18.92■□□□□ 0.62
ERCC2P18074 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC2P18074 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC2P18074 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ERCC2P18074 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ERCC2P18074 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC2P18074 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC2P18074 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC2P18074 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ERCC2P18074 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ERCC2P18074 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC2P18074 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC2P18074 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ERCC2P18074 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC2P18074 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
ERCC2P18074 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC2P18074 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC2P18074 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC2P18074 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ERCC2P18074 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC2P18074 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ERCC2P18074 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC2P18074 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
ERCC2P18074 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC2P18074 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ERCC2P18074 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC2P18074 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC2P18074 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC2P18074 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC2P18074 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 AC093677.2-201ENST00000600169 1863 ntBASIC18.9■□□□□ 0.62
ERCC2P18074 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.9■□□□□ 0.62
ERCC2P18074 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.9■□□□□ 0.62
ERCC2P18074 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ERCC2P18074 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.9■□□□□ 0.62
ERCC2P18074 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ERCC2P18074 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.9■□□□□ 0.62
ERCC2P18074 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ERCC2P18074 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.9■□□□□ 0.62
ERCC2P18074 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.9■□□□□ 0.62
ERCC2P18074 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ERCC2P18074 AL354751.1-201ENST00000412768 1863 ntBASIC18.9■□□□□ 0.62
ERCC2P18074 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC2P18074 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.9■□□□□ 0.62
ERCC2P18074 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ERCC2P18074 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.9■□□□□ 0.62
ERCC2P18074 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ERCC2P18074 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.89■□□□□ 0.62
ERCC2P18074 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.89■□□□□ 0.61
ERCC2P18074 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC2P18074 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC2P18074 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC2P18074 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC2P18074 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.89■□□□□ 0.61
ERCC2P18074 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC2P18074 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC2P18074 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
ERCC2P18074 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.89■□□□□ 0.61
ERCC2P18074 AC104076.2-201ENST00000448912 469 ntBASIC18.89■□□□□ 0.61
ERCC2P18074 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC2P18074 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.89■□□□□ 0.61
ERCC2P18074 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.89■□□□□ 0.61
ERCC2P18074 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.89■□□□□ 0.61
ERCC2P18074 RN7SL850P-201ENST00000579959 291 ntBASIC18.89■□□□□ 0.61
ERCC2P18074 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.89■□□□□ 0.61
ERCC2P18074 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.89■□□□□ 0.61
ERCC2P18074 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC2P18074 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC2P18074 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.89■□□□□ 0.61
ERCC2P18074 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ERCC2P18074 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms