Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 KRT18P27-201ENST00000427733 1299 ntBASIC22.41■■□□□ 1.18
COL11A2P13942 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC22.41■■□□□ 1.18
COL11A2P13942 RNA5SP416-201ENST00000516838 111 ntBASIC22.41■■□□□ 1.18
COL11A2P13942 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC22.41■■□□□ 1.18
COL11A2P13942 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC22.41■■□□□ 1.18
COL11A2P13942 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.41■■□□□ 1.18
COL11A2P13942 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.41■■□□□ 1.18
COL11A2P13942 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL11A2P13942 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.41■■□□□ 1.18
COL11A2P13942 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL11A2P13942 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC22.41■■□□□ 1.18
COL11A2P13942 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL11A2P13942 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.41■■□□□ 1.18
COL11A2P13942 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
COL11A2P13942 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A2P13942 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A2P13942 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A2P13942 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.4■■□□□ 1.18
COL11A2P13942 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A2P13942 AC009947.1-201ENST00000444350 727 ntBASIC22.4■■□□□ 1.18
COL11A2P13942 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC22.4■■□□□ 1.18
COL11A2P13942 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A2P13942 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC22.4■■□□□ 1.18
COL11A2P13942 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
COL11A2P13942 COPE-211ENST00000600932 1144 ntTSL 5 BASIC22.4■■□□□ 1.18
COL11A2P13942 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
COL11A2P13942 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC22.4■■□□□ 1.18
COL11A2P13942 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC22.4■■□□□ 1.18
COL11A2P13942 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
COL11A2P13942 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A2P13942 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.4■■□□□ 1.18
COL11A2P13942 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A2P13942 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A2P13942 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.4■■□□□ 1.18
COL11A2P13942 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A2P13942 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A2P13942 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A2P13942 PMP22-202ENST00000395936 816 ntTSL 3 BASIC22.4■■□□□ 1.18
COL11A2P13942 CRCP-205ENST00000431089 942 ntTSL 2 BASIC22.4■■□□□ 1.18
COL11A2P13942 AP006288.1-201ENST00000446065 395 ntBASIC22.4■■□□□ 1.18
COL11A2P13942 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A2P13942 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC22.4■■□□□ 1.18
COL11A2P13942 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A2P13942 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC22.4■■□□□ 1.18
COL11A2P13942 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A2P13942 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A2P13942 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL11A2P13942 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
COL11A2P13942 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL11A2P13942 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL11A2P13942 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL11A2P13942 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL11A2P13942 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL11A2P13942 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
COL11A2P13942 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.39■■□□□ 1.17
COL11A2P13942 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL11A2P13942 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.39■■□□□ 1.17
COL11A2P13942 LAGE3P1-201ENST00000425356 484 ntBASIC22.39■■□□□ 1.17
COL11A2P13942 METTL21AP1-201ENST00000438852 635 ntBASIC22.39■■□□□ 1.17
COL11A2P13942 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.39■■□□□ 1.17
COL11A2P13942 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC22.39■■□□□ 1.17
COL11A2P13942 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.39■■□□□ 1.17
COL11A2P13942 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.39■■□□□ 1.17
COL11A2P13942 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC22.39■■□□□ 1.17
COL11A2P13942 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL11A2P13942 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL11A2P13942 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL11A2P13942 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC22.39■■□□□ 1.17
COL11A2P13942 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL11A2P13942 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
COL11A2P13942 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL11A2P13942 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC22.38■■□□□ 1.17
COL11A2P13942 NKAPP1-205ENST00000585790 367 ntBASIC22.38■■□□□ 1.17
COL11A2P13942 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.38■■□□□ 1.17
COL11A2P13942 AC008687.5-201ENST00000593746 558 ntBASIC22.38■■□□□ 1.17
COL11A2P13942 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC22.38■■□□□ 1.17
COL11A2P13942 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.38■■□□□ 1.17
COL11A2P13942 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
COL11A2P13942 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.38■■□□□ 1.17
COL11A2P13942 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A2P13942 AC023274.1-201ENST00000418278 595 ntBASIC22.37■■□□□ 1.17
COL11A2P13942 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
COL11A2P13942 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
COL11A2P13942 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A2P13942 SDCCAG3P1-201ENST00000589292 1150 ntBASIC22.37■■□□□ 1.17
COL11A2P13942 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC22.37■■□□□ 1.17
COL11A2P13942 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.37■■□□□ 1.17
COL11A2P13942 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A2P13942 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A2P13942 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A2P13942 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.37■■□□□ 1.17
COL11A2P13942 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A2P13942 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A2P13942 AC079776.2-201ENST00000641154 1609 ntBASIC22.37■■□□□ 1.17
COL11A2P13942 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.37■■□□□ 1.17
COL11A2P13942 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A2P13942 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC22.37■■□□□ 1.17
COL11A2P13942 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.37■■□□□ 1.17
COL11A2P13942 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
COL11A2P13942 AC112482.1-201ENST00000492080 688 ntBASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms