Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 AC092597.1-201ENST00000487352 616 ntBASIC17.45■□□□□ 0.38
ZNF888P0CJ79 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF888P0CJ79 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 PVRIG2P-201ENST00000435460 978 ntBASIC17.44■□□□□ 0.38
ZNF888P0CJ79 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 NTF6B-201ENST00000591913 560 ntBASIC17.44■□□□□ 0.38
ZNF888P0CJ79 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF888P0CJ79 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 AL391807.1-203ENST00000604392 2365 ntBASIC17.43■□□□□ 0.38
ZNF888P0CJ79 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.43■□□□□ 0.38
ZNF888P0CJ79 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 AL136038.4-201ENST00000603606 1261 ntBASIC17.43■□□□□ 0.38
ZNF888P0CJ79 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.43■□□□□ 0.38
ZNF888P0CJ79 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF888P0CJ79 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms