Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
TPM3P06753 AC080080.1-201ENST00000625121 2420 ntBASIC20.63■□□□□ 0.89
TPM3P06753 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TPM3P06753 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM3P06753 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TPM3P06753 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM3P06753 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM3P06753 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TPM3P06753 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.63■□□□□ 0.89
TPM3P06753 AC092437.1-201ENST00000624794 1048 ntBASIC20.63■□□□□ 0.89
TPM3P06753 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.63■□□□□ 0.89
TPM3P06753 AC068587.9-201ENST00000641814 219 ntBASIC20.63■□□□□ 0.89
TPM3P06753 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TPM3P06753 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM3P06753 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM3P06753 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TPM3P06753 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TPM3P06753 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TPM3P06753 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TPM3P06753 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.63■□□□□ 0.89
TPM3P06753 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM3P06753 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.62■□□□□ 0.89
TPM3P06753 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.62■□□□□ 0.89
TPM3P06753 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TPM3P06753 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.62■□□□□ 0.89
TPM3P06753 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 AC106820.2-201ENST00000563775 3264 ntBASIC20.62■□□□□ 0.89
TPM3P06753 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.62■□□□□ 0.89
TPM3P06753 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.62■□□□□ 0.89
TPM3P06753 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.62■□□□□ 0.89
TPM3P06753 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.62■□□□□ 0.89
TPM3P06753 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.62■□□□□ 0.89
TPM3P06753 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
TPM3P06753 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TPM3P06753 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TPM3P06753 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM3P06753 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM3P06753 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TPM3P06753 AL499627.1-201ENST00000569373 2188 ntBASIC20.61■□□□□ 0.89
TPM3P06753 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.61■□□□□ 0.89
TPM3P06753 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.61■□□□□ 0.89
TPM3P06753 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM3P06753 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.61■□□□□ 0.89
TPM3P06753 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TPM3P06753 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.61■□□□□ 0.89
TPM3P06753 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.61■□□□□ 0.89
TPM3P06753 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.61■□□□□ 0.89
TPM3P06753 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TPM3P06753 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TPM3P06753 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TPM3P06753 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM3P06753 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.61■□□□□ 0.89
TPM3P06753 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM3P06753 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.61■□□□□ 0.89
TPM3P06753 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM3P06753 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPM3P06753 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.6■□□□□ 0.89
TPM3P06753 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM3P06753 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.6■□□□□ 0.89
TPM3P06753 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM3P06753 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM3P06753 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.6■□□□□ 0.89
TPM3P06753 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TPM3P06753 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TPM3P06753 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TPM3P06753 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TPM3P06753 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM3P06753 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM3P06753 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.6■□□□□ 0.89
TPM3P06753 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.6■□□□□ 0.89
TPM3P06753 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.6■□□□□ 0.89
TPM3P06753 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TPM3P06753 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TPM3P06753 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.6■□□□□ 0.89
TPM3P06753 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TPM3P06753 NBPF21P-201ENST00000425093 1451 ntBASIC20.6■□□□□ 0.89
TPM3P06753 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TPM3P06753 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TPM3P06753 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TPM3P06753 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms