Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.83■□□□□ 0.44
KRT6AP02538 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT6AP02538 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.83■□□□□ 0.44
KRT6AP02538 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6AP02538 AC093677.2-201ENST00000600169 1863 ntBASIC17.83■□□□□ 0.44
KRT6AP02538 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT6AP02538 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6AP02538 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6AP02538 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT6AP02538 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT6AP02538 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6AP02538 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
KRT6AP02538 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6AP02538 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6AP02538 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
KRT6AP02538 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6AP02538 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT6AP02538 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6AP02538 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT6AP02538 KRT8P50-201ENST00000562022 1438 ntBASIC17.82■□□□□ 0.44
KRT6AP02538 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
KRT6AP02538 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT6AP02538 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6AP02538 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6AP02538 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT6AP02538 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT6AP02538 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6AP02538 UNC93B2-201ENST00000285383 730 ntBASIC17.82■□□□□ 0.44
KRT6AP02538 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6AP02538 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT6AP02538 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6AP02538 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6AP02538 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT6AP02538 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
KRT6AP02538 SLC25A1P2-201ENST00000430693 912 ntBASIC17.82■□□□□ 0.44
KRT6AP02538 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT6AP02538 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.82■□□□□ 0.44
KRT6AP02538 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT6AP02538 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT6AP02538 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6AP02538 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6AP02538 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT6AP02538 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
KRT6AP02538 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6AP02538 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT6AP02538 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
KRT6AP02538 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6AP02538 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6AP02538 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6AP02538 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT6AP02538 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT6AP02538 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT6AP02538 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6AP02538 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6AP02538 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT6AP02538 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6AP02538 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT6AP02538 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
KRT6AP02538 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6AP02538 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6AP02538 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.81■□□□□ 0.44
KRT6AP02538 TSPY17P-201ENST00000450329 467 ntBASIC17.81■□□□□ 0.44
KRT6AP02538 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
KRT6AP02538 AC008550.1-201ENST00000511500 884 ntBASIC17.81■□□□□ 0.44
KRT6AP02538 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
KRT6AP02538 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT6AP02538 MIR4785-201ENST00000585005 73 ntBASIC17.81■□□□□ 0.44
KRT6AP02538 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6AP02538 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT6AP02538 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6AP02538 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT6AP02538 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT6AP02538 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT6AP02538 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.8■□□□□ 0.44
KRT6AP02538 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT6AP02538 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.8■□□□□ 0.44
KRT6AP02538 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
KRT6AP02538 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.8■□□□□ 0.44
KRT6AP02538 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT6AP02538 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT6AP02538 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT6AP02538 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT6AP02538 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
KRT6AP02538 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT6AP02538 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT6AP02538 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT6AP02538 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.8■□□□□ 0.44
KRT6AP02538 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.8■□□□□ 0.44
KRT6AP02538 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.8■□□□□ 0.44
KRT6AP02538 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.8■□□□□ 0.44
KRT6AP02538 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT6AP02538 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT6AP02538 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT6AP02538 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT6AP02538 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT6AP02538 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT6AP02538 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT6AP02538 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT6AP02538 PKD1P1-201ENST00000458669 6805 ntBASIC17.8■□□□□ 0.44
KRT6AP02538 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms