Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL1A1P02452 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL1A1P02452 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL1A1P02452 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL1A1P02452 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.06■■□□□ 1.12
COL1A1P02452 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC22.06■■□□□ 1.12
COL1A1P02452 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL1A1P02452 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
COL1A1P02452 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL1A1P02452 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
COL1A1P02452 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
COL1A1P02452 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
COL1A1P02452 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC22.06■■□□□ 1.12
COL1A1P02452 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC22.06■■□□□ 1.12
COL1A1P02452 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC22.06■■□□□ 1.12
COL1A1P02452 PMS2P1-201ENST00000431037 1228 ntBASIC22.06■■□□□ 1.12
COL1A1P02452 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC22.06■■□□□ 1.12
COL1A1P02452 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC22.06■■□□□ 1.12
COL1A1P02452 AC126763.1-201ENST00000552015 2118 ntBASIC22.06■■□□□ 1.12
COL1A1P02452 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.06■■□□□ 1.12
COL1A1P02452 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL1A1P02452 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL1A1P02452 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
COL1A1P02452 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL1A1P02452 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL1A1P02452 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
COL1A1P02452 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.05■■□□□ 1.12
COL1A1P02452 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC22.05■■□□□ 1.12
COL1A1P02452 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL1A1P02452 TP73-AS1-207ENST00000624167 988 ntBASIC22.05■■□□□ 1.12
COL1A1P02452 CCNC-219ENST00000627680 896 ntTSL 5 BASIC22.05■■□□□ 1.12
COL1A1P02452 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
COL1A1P02452 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL1A1P02452 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
COL1A1P02452 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL1A1P02452 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.05■■□□□ 1.12
COL1A1P02452 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL1A1P02452 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL1A1P02452 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL1A1P02452 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL1A1P02452 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC22.04■■□□□ 1.12
COL1A1P02452 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
COL1A1P02452 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
COL1A1P02452 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
COL1A1P02452 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
COL1A1P02452 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC22.04■■□□□ 1.12
COL1A1P02452 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC22.04■■□□□ 1.12
COL1A1P02452 AC079776.4-201ENST00000511039 504 ntBASIC22.04■■□□□ 1.12
COL1A1P02452 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
COL1A1P02452 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC22.04■■□□□ 1.12
COL1A1P02452 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC22.04■■□□□ 1.12
COL1A1P02452 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC22.04■■□□□ 1.12
COL1A1P02452 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC22.04■■□□□ 1.12
COL1A1P02452 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC22.04■■□□□ 1.12
COL1A1P02452 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC22.04■■□□□ 1.12
COL1A1P02452 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL1A1P02452 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC22.04■■□□□ 1.12
COL1A1P02452 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL1A1P02452 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
COL1A1P02452 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.04■■□□□ 1.12
COL1A1P02452 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
COL1A1P02452 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL1A1P02452 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL1A1P02452 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
COL1A1P02452 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC22.03■■□□□ 1.12
COL1A1P02452 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL1A1P02452 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC22.03■■□□□ 1.12
COL1A1P02452 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL1A1P02452 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL1A1P02452 RNA5SP419-201ENST00000515908 135 ntBASIC22.03■■□□□ 1.12
COL1A1P02452 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.03■■□□□ 1.12
COL1A1P02452 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.03■■□□□ 1.12
COL1A1P02452 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC22.03■■□□□ 1.12
COL1A1P02452 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC22.03■■□□□ 1.12
COL1A1P02452 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
COL1A1P02452 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL1A1P02452 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL1A1P02452 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL1A1P02452 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL1A1P02452 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL1A1P02452 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC22.03■■□□□ 1.12
COL1A1P02452 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL1A1P02452 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL1A1P02452 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL1A1P02452 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL1A1P02452 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
COL1A1P02452 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC22.03■■□□□ 1.12
COL1A1P02452 AC064862.7-201ENST00000604520 867 ntBASIC22.03■■□□□ 1.12
COL1A1P02452 AC117500.6-201ENST00000624871 588 ntBASIC22.03■■□□□ 1.12
COL1A1P02452 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL1A1P02452 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
COL1A1P02452 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.02■■□□□ 1.12
COL1A1P02452 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL1A1P02452 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.02■■□□□ 1.12
COL1A1P02452 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL1A1P02452 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL1A1P02452 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.02■■□□□ 1.12
COL1A1P02452 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL1A1P02452 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL1A1P02452 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms