Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.42■□□□□ 0.54
PDGFBP01127 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.42■□□□□ 0.54
PDGFBP01127 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFBP01127 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
PDGFBP01127 AC097374.2-201ENST00000618617 1306 ntBASIC18.42■□□□□ 0.54
PDGFBP01127 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.41■□□□□ 0.54
PDGFBP01127 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.41■□□□□ 0.54
PDGFBP01127 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFBP01127 TCF3P1-201ENST00000423021 1937 ntBASIC18.41■□□□□ 0.54
PDGFBP01127 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFBP01127 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFBP01127 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFBP01127 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFBP01127 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFBP01127 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFBP01127 LAGE3P1-201ENST00000425356 484 ntBASIC18.41■□□□□ 0.54
PDGFBP01127 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.41■□□□□ 0.54
PDGFBP01127 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFBP01127 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.41■□□□□ 0.54
PDGFBP01127 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
PDGFBP01127 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.41■□□□□ 0.54
PDGFBP01127 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.41■□□□□ 0.54
PDGFBP01127 AC068587.9-201ENST00000641814 219 ntBASIC18.41■□□□□ 0.54
PDGFBP01127 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.41■□□□□ 0.54
PDGFBP01127 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFBP01127 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFBP01127 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PDGFBP01127 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFBP01127 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFBP01127 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFBP01127 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PDGFBP01127 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PDGFBP01127 AC092667.1-201ENST00000434301 2586 ntBASIC18.4■□□□□ 0.54
PDGFBP01127 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFBP01127 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.4■□□□□ 0.54
PDGFBP01127 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFBP01127 AL163051.1-201ENST00000569214 1512 ntBASIC18.4■□□□□ 0.54
PDGFBP01127 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PDGFBP01127 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.4■□□□□ 0.54
PDGFBP01127 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFBP01127 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFBP01127 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFBP01127 MTCL1P1-201ENST00000446207 792 ntBASIC18.4■□□□□ 0.54
PDGFBP01127 AC113404.2-201ENST00000507884 177 ntBASIC18.4■□□□□ 0.54
PDGFBP01127 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFBP01127 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDGFBP01127 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFBP01127 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.4■□□□□ 0.54
PDGFBP01127 FEM1AP3-201ENST00000403722 1741 ntBASIC18.4■□□□□ 0.54
PDGFBP01127 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFBP01127 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFBP01127 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFBP01127 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PDGFBP01127 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDGFBP01127 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.39■□□□□ 0.54
PDGFBP01127 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDGFBP01127 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFBP01127 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFBP01127 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.39■□□□□ 0.53
PDGFBP01127 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFBP01127 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.39■□□□□ 0.53
PDGFBP01127 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFBP01127 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFBP01127 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PDGFBP01127 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFBP01127 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFBP01127 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.39■□□□□ 0.53
PDGFBP01127 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFBP01127 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
PDGFBP01127 AC108751.1-201ENST00000490852 363 ntBASIC18.39■□□□□ 0.53
PDGFBP01127 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.39■□□□□ 0.53
PDGFBP01127 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.39■□□□□ 0.53
PDGFBP01127 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFBP01127 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.39■□□□□ 0.53
PDGFBP01127 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.39■□□□□ 0.53
PDGFBP01127 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.39■□□□□ 0.53
PDGFBP01127 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.39■□□□□ 0.53
PDGFBP01127 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.39■□□□□ 0.53
PDGFBP01127 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFBP01127 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFBP01127 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.39■□□□□ 0.53
PDGFBP01127 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFBP01127 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.39■□□□□ 0.53
PDGFBP01127 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFBP01127 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PDGFBP01127 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PDGFBP01127 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PDGFBP01127 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFBP01127 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFBP01127 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFBP01127 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFBP01127 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.38■□□□□ 0.53
PDGFBP01127 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFBP01127 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.38■□□□□ 0.53
PDGFBP01127 PAWRP1-201ENST00000451083 565 ntBASIC18.38■□□□□ 0.53
PDGFBP01127 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.38■□□□□ 0.53
PDGFBP01127 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.38■□□□□ 0.53
PDGFBP01127 BX005266.1-201ENST00000473402 457 ntBASIC18.38■□□□□ 0.53
PDGFBP01127 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PDGFBP01127 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms