Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TRUB2O95900 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.27■□□□□ 0.68
TRUB2O95900 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRUB2O95900 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.27■□□□□ 0.68
TRUB2O95900 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRUB2O95900 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TRUB2O95900 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRUB2O95900 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRUB2O95900 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.27■□□□□ 0.68
TRUB2O95900 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.27■□□□□ 0.68
TRUB2O95900 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.27■□□□□ 0.68
TRUB2O95900 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.27■□□□□ 0.68
TRUB2O95900 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRUB2O95900 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
TRUB2O95900 AC092647.4-201ENST00000457211 535 ntBASIC19.27■□□□□ 0.68
TRUB2O95900 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.27■□□□□ 0.68
TRUB2O95900 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.27■□□□□ 0.68
TRUB2O95900 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.27■□□□□ 0.68
TRUB2O95900 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRUB2O95900 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRUB2O95900 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
TRUB2O95900 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRUB2O95900 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRUB2O95900 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRUB2O95900 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRUB2O95900 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRUB2O95900 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
TRUB2O95900 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.26■□□□□ 0.67
TRUB2O95900 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRUB2O95900 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 ABALON-201ENST00000629058 1903 ntBASIC19.26■□□□□ 0.67
TRUB2O95900 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 STARP1-201ENST00000397973 869 ntBASIC19.26■□□□□ 0.67
TRUB2O95900 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.26■□□□□ 0.67
TRUB2O95900 FAM8A6P-201ENST00000407496 1135 ntBASIC19.26■□□□□ 0.67
TRUB2O95900 SPDYE15P-201ENST00000424157 909 ntBASIC19.26■□□□□ 0.67
TRUB2O95900 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 RASA4DP-201ENST00000460726 1199 ntBASIC19.26■□□□□ 0.67
TRUB2O95900 AL359075.1-203ENST00000462729 1002 ntBASIC19.26■□□□□ 0.67
TRUB2O95900 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 AC034232.1-201ENST00000506026 1064 ntBASIC19.26■□□□□ 0.67
TRUB2O95900 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.26■□□□□ 0.67
TRUB2O95900 MIR3180-4-201ENST00000582223 153 ntBASIC19.26■□□□□ 0.67
TRUB2O95900 AL157888.1-201ENST00000631930 593 ntBASIC19.26■□□□□ 0.67
TRUB2O95900 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TRUB2O95900 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRUB2O95900 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRUB2O95900 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB2O95900 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
TRUB2O95900 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.25■□□□□ 0.67
TRUB2O95900 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB2O95900 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB2O95900 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB2O95900 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB2O95900 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB2O95900 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.25■□□□□ 0.67
TRUB2O95900 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB2O95900 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB2O95900 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB2O95900 KRT18P38-201ENST00000449496 1282 ntBASIC19.25■□□□□ 0.67
TRUB2O95900 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TRUB2O95900 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB2O95900 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.25■□□□□ 0.67
TRUB2O95900 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRUB2O95900 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.25■□□□□ 0.67
TRUB2O95900 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.25■□□□□ 0.67
TRUB2O95900 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB2O95900 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB2O95900 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.25■□□□□ 0.67
TRUB2O95900 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB2O95900 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRUB2O95900 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRUB2O95900 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRUB2O95900 AL163051.1-201ENST00000569214 1512 ntBASIC19.25■□□□□ 0.67
TRUB2O95900 AC135776.1-201ENST00000319817 2481 ntBASIC19.25■□□□□ 0.67
TRUB2O95900 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB2O95900 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TRUB2O95900 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB2O95900 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB2O95900 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.24■□□□□ 0.67
TRUB2O95900 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB2O95900 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms