Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD4O95243 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD4O95243 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD4O95243 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.89■■□□□ 1.1
MBD4O95243 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MBD4O95243 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.89■■□□□ 1.1
MBD4O95243 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
MBD4O95243 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
MBD4O95243 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
MBD4O95243 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
MBD4O95243 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MBD4O95243 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
MBD4O95243 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MBD4O95243 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MBD4O95243 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.89■■□□□ 1.09
MBD4O95243 AP002383.4-201ENST00000442518 975 ntBASIC21.89■■□□□ 1.09
MBD4O95243 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.89■■□□□ 1.09
MBD4O95243 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.89■■□□□ 1.09
MBD4O95243 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.89■■□□□ 1.09
MBD4O95243 AC092119.3-201ENST00000612618 583 ntBASIC21.89■■□□□ 1.09
MBD4O95243 AC004263.2-201ENST00000617183 678 ntBASIC21.89■■□□□ 1.09
MBD4O95243 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.89■■□□□ 1.09
MBD4O95243 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
MBD4O95243 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.89■■□□□ 1.09
MBD4O95243 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
MBD4O95243 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MBD4O95243 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.89■■□□□ 1.09
MBD4O95243 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.89■■□□□ 1.09
MBD4O95243 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MBD4O95243 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MBD4O95243 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MBD4O95243 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MBD4O95243 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MBD4O95243 AC073592.3-201ENST00000625118 1834 ntBASIC21.88■■□□□ 1.09
MBD4O95243 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.88■■□□□ 1.09
MBD4O95243 ATP5G2P1-201ENST00000433580 426 ntBASIC21.88■■□□□ 1.09
MBD4O95243 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.88■■□□□ 1.09
MBD4O95243 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.88■■□□□ 1.09
MBD4O95243 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
MBD4O95243 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.88■■□□□ 1.09
MBD4O95243 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.88■■□□□ 1.09
MBD4O95243 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.88■■□□□ 1.09
MBD4O95243 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MBD4O95243 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MBD4O95243 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
MBD4O95243 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
MBD4O95243 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.87■■□□□ 1.09
MBD4O95243 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MBD4O95243 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
MBD4O95243 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.87■■□□□ 1.09
MBD4O95243 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MBD4O95243 CHCHD2P8-201ENST00000429873 447 ntBASIC21.87■■□□□ 1.09
MBD4O95243 HCG4P8-203ENST00000443049 980 ntBASIC21.87■■□□□ 1.09
MBD4O95243 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.87■■□□□ 1.09
MBD4O95243 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MBD4O95243 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.87■■□□□ 1.09
MBD4O95243 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
MBD4O95243 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.87■■□□□ 1.09
MBD4O95243 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
MBD4O95243 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.87■■□□□ 1.09
MBD4O95243 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.87■■□□□ 1.09
MBD4O95243 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MBD4O95243 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
MBD4O95243 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.87■■□□□ 1.09
MBD4O95243 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MBD4O95243 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
MBD4O95243 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MBD4O95243 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MBD4O95243 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
MBD4O95243 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MBD4O95243 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MBD4O95243 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MBD4O95243 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MBD4O95243 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MBD4O95243 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MBD4O95243 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.86■■□□□ 1.09
MBD4O95243 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.86■■□□□ 1.09
MBD4O95243 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.86■■□□□ 1.09
MBD4O95243 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.86■■□□□ 1.09
MBD4O95243 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.86■■□□□ 1.09
MBD4O95243 MIR3180-1-201ENST00000580374 94 ntBASIC21.86■■□□□ 1.09
MBD4O95243 MIR3180-3-201ENST00000584616 94 ntBASIC21.86■■□□□ 1.09
MBD4O95243 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
MBD4O95243 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
MBD4O95243 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MBD4O95243 AL353692.3-201ENST00000407031 1396 ntBASIC21.86■■□□□ 1.09
MBD4O95243 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
MBD4O95243 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
MBD4O95243 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MBD4O95243 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MBD4O95243 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MBD4O95243 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MBD4O95243 AL138781.2-201ENST00000617896 1843 ntBASIC21.85■■□□□ 1.09
MBD4O95243 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MBD4O95243 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MBD4O95243 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MBD4O95243 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.85■■□□□ 1.09
MBD4O95243 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
MBD4O95243 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MBD4O95243 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms