Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 KRT16P5-201ENST00000455284 522 ntBASIC16.17■□□□□ 0.18
KDM4BO94953 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.17■□□□□ 0.18
KDM4BO94953 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KDM4BO94953 AL023875.1-201ENST00000640777 796 ntBASIC16.17■□□□□ 0.18
KDM4BO94953 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
KDM4BO94953 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
KDM4BO94953 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDM4BO94953 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
KDM4BO94953 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
KDM4BO94953 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDM4BO94953 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDM4BO94953 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDM4BO94953 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDM4BO94953 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDM4BO94953 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDM4BO94953 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
KDM4BO94953 AL499627.1-201ENST00000569373 2188 ntBASIC16.16■□□□□ 0.18
KDM4BO94953 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
KDM4BO94953 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KDM4BO94953 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDM4BO94953 ESRRAP1-201ENST00000400596 1257 ntBASIC16.16■□□□□ 0.18
KDM4BO94953 KRASP1-201ENST00000407852 552 ntBASIC16.16■□□□□ 0.18
KDM4BO94953 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
KDM4BO94953 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.16■□□□□ 0.18
KDM4BO94953 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.16■□□□□ 0.18
KDM4BO94953 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.16■□□□□ 0.18
KDM4BO94953 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.16■□□□□ 0.18
KDM4BO94953 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.16■□□□□ 0.18
KDM4BO94953 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.16■□□□□ 0.18
KDM4BO94953 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KDM4BO94953 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.16■□□□□ 0.18
KDM4BO94953 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.16■□□□□ 0.18
KDM4BO94953 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.16■□□□□ 0.18
KDM4BO94953 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
KDM4BO94953 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
KDM4BO94953 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.16■□□□□ 0.18
KDM4BO94953 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDM4BO94953 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.16■□□□□ 0.18
KDM4BO94953 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.16■□□□□ 0.18
KDM4BO94953 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KDM4BO94953 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.16■□□□□ 0.18
KDM4BO94953 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDM4BO94953 ESPNP-201ENST00000270691 2015 ntBASIC16.16■□□□□ 0.18
KDM4BO94953 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDM4BO94953 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDM4BO94953 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.16■□□□□ 0.18
KDM4BO94953 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
KDM4BO94953 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.15■□□□□ 0.18
KDM4BO94953 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.15■□□□□ 0.18
KDM4BO94953 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.15■□□□□ 0.18
KDM4BO94953 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.15■□□□□ 0.18
KDM4BO94953 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
KDM4BO94953 AC133681.1-201ENST00000465482 601 ntBASIC16.15■□□□□ 0.18
KDM4BO94953 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.15■□□□□ 0.18
KDM4BO94953 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
KDM4BO94953 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.15■□□□□ 0.18
KDM4BO94953 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KDM4BO94953 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KDM4BO94953 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
KDM4BO94953 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.15■□□□□ 0.18
KDM4BO94953 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
KDM4BO94953 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDM4BO94953 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms