Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.2■□□□□ 0.34
HCN1O60741 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.2■□□□□ 0.34
HCN1O60741 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.2■□□□□ 0.34
HCN1O60741 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HCN1O60741 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HCN1O60741 AP003041.3-201ENST00000527151 707 ntBASIC17.2■□□□□ 0.34
HCN1O60741 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.2■□□□□ 0.34
HCN1O60741 AC141257.4-201ENST00000634557 245 ntBASIC17.2■□□□□ 0.34
HCN1O60741 AC136944.6-201ENST00000634818 245 ntBASIC17.2■□□□□ 0.34
HCN1O60741 AL031432.5-201ENST00000641059 760 ntBASIC17.2■□□□□ 0.34
HCN1O60741 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HCN1O60741 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HCN1O60741 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.2■□□□□ 0.34
HCN1O60741 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.2■□□□□ 0.34
HCN1O60741 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HCN1O60741 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.2■□□□□ 0.34
HCN1O60741 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HCN1O60741 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HCN1O60741 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HCN1O60741 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HCN1O60741 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.2■□□□□ 0.34
HCN1O60741 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HCN1O60741 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HCN1O60741 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HCN1O60741 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCN1O60741 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.19■□□□□ 0.34
HCN1O60741 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCN1O60741 ANO7L1-203ENST00000602586 1720 ntBASIC17.19■□□□□ 0.34
HCN1O60741 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.19■□□□□ 0.34
HCN1O60741 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCN1O60741 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCN1O60741 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCN1O60741 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.19■□□□□ 0.34
HCN1O60741 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.19■□□□□ 0.34
HCN1O60741 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.19■□□□□ 0.34
HCN1O60741 COX11P1-201ENST00000489116 835 ntBASIC17.19■□□□□ 0.34
HCN1O60741 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.19■□□□□ 0.34
HCN1O60741 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.19■□□□□ 0.34
HCN1O60741 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.19■□□□□ 0.34
HCN1O60741 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.19■□□□□ 0.34
HCN1O60741 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.19■□□□□ 0.34
HCN1O60741 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.19■□□□□ 0.34
HCN1O60741 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HCN1O60741 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HCN1O60741 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCN1O60741 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HCN1O60741 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCN1O60741 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCN1O60741 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HCN1O60741 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HCN1O60741 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
HCN1O60741 AL133373.2-201ENST00000623187 2828 ntBASIC17.19■□□□□ 0.34
HCN1O60741 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HCN1O60741 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HCN1O60741 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.19■□□□□ 0.34
HCN1O60741 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCN1O60741 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCN1O60741 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
HCN1O60741 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCN1O60741 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.19■□□□□ 0.34
HCN1O60741 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HCN1O60741 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.18■□□□□ 0.34
HCN1O60741 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
HCN1O60741 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HCN1O60741 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.18■□□□□ 0.34
HCN1O60741 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 RNF152P1-201ENST00000397754 604 ntBASIC17.18■□□□□ 0.34
HCN1O60741 AC117947.1-201ENST00000427448 529 ntBASIC17.18■□□□□ 0.34
HCN1O60741 TSPY23P-201ENST00000440136 739 ntBASIC17.18■□□□□ 0.34
HCN1O60741 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HCN1O60741 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.18■□□□□ 0.34
HCN1O60741 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.18■□□□□ 0.34
HCN1O60741 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.18■□□□□ 0.34
HCN1O60741 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.18■□□□□ 0.34
HCN1O60741 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCN1O60741 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.17■□□□□ 0.34
HCN1O60741 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HCN1O60741 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HCN1O60741 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HCN1O60741 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms