Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 MIR6786-201ENST00000616843 113 ntBASIC16.29■□□□□ 0.2
GMDSO60547 AC130371.2-201ENST00000619443 611 ntBASIC16.29■□□□□ 0.2
GMDSO60547 AC113410.3-201ENST00000623366 203 ntBASIC16.29■□□□□ 0.2
GMDSO60547 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.29■□□□□ 0.2
GMDSO60547 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GMDSO60547 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GMDSO60547 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GMDSO60547 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GMDSO60547 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.28■□□□□ 0.2
GMDSO60547 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
GMDSO60547 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.28■□□□□ 0.2
GMDSO60547 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.28■□□□□ 0.2
GMDSO60547 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.28■□□□□ 0.2
GMDSO60547 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GMDSO60547 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.28■□□□□ 0.2
GMDSO60547 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.28■□□□□ 0.2
GMDSO60547 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
GMDSO60547 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GMDSO60547 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.28■□□□□ 0.2
GMDSO60547 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.28■□□□□ 0.2
GMDSO60547 AL355355.2-201ENST00000442321 338 ntBASIC16.28■□□□□ 0.2
GMDSO60547 AC091390.4-202ENST00000476426 537 ntBASIC16.28■□□□□ 0.2
GMDSO60547 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 NUDT16P1-203ENST00000513809 620 ntBASIC16.28■□□□□ 0.2
GMDSO60547 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.28■□□□□ 0.2
GMDSO60547 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.28■□□□□ 0.2
GMDSO60547 AC011298.2-201ENST00000617989 482 ntBASIC16.28■□□□□ 0.2
GMDSO60547 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
GMDSO60547 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GMDSO60547 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
GMDSO60547 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GMDSO60547 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GMDSO60547 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
GMDSO60547 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.27■□□□□ 0.2
GMDSO60547 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
GMDSO60547 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
GMDSO60547 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GMDSO60547 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GMDSO60547 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.27■□□□□ 0.2
GMDSO60547 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GMDSO60547 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GMDSO60547 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
GMDSO60547 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.27■□□□□ 0.2
GMDSO60547 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GMDSO60547 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GMDSO60547 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
GMDSO60547 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.27■□□□□ 0.2
GMDSO60547 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.27■□□□□ 0.2
GMDSO60547 B3GAT3P1-201ENST00000471720 806 ntBASIC16.27■□□□□ 0.2
GMDSO60547 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.27■□□□□ 0.2
GMDSO60547 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GMDSO60547 AC116562.2-201ENST00000507042 360 ntBASIC16.27■□□□□ 0.2
GMDSO60547 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GMDSO60547 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.27■□□□□ 0.2
GMDSO60547 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
GMDSO60547 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.27■□□□□ 0.2
GMDSO60547 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
GMDSO60547 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.27■□□□□ 0.2
GMDSO60547 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GMDSO60547 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GMDSO60547 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GMDSO60547 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
GMDSO60547 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
GMDSO60547 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
GMDSO60547 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.27■□□□□ 0.19
GMDSO60547 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.27■□□□□ 0.19
GMDSO60547 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.27■□□□□ 0.19
GMDSO60547 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GMDSO60547 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
GMDSO60547 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GMDSO60547 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
GMDSO60547 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
GMDSO60547 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GMDSO60547 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms