Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ITM2AO43736 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.05■□□□□ 0.48
ITM2AO43736 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ITM2AO43736 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
ITM2AO43736 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ITM2AO43736 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.05■□□□□ 0.48
ITM2AO43736 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ITM2AO43736 AC006116.8-202ENST00000587620 1550 ntBASIC18.04■□□□□ 0.48
ITM2AO43736 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ITM2AO43736 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
ITM2AO43736 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.04■□□□□ 0.48
ITM2AO43736 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ITM2AO43736 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ITM2AO43736 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.04■□□□□ 0.48
ITM2AO43736 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
ITM2AO43736 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ITM2AO43736 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
ITM2AO43736 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ITM2AO43736 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ITM2AO43736 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
ITM2AO43736 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ITM2AO43736 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.04■□□□□ 0.48
ITM2AO43736 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.04■□□□□ 0.48
ITM2AO43736 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.04■□□□□ 0.48
ITM2AO43736 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ITM2AO43736 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.04■□□□□ 0.48
ITM2AO43736 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
ITM2AO43736 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ITM2AO43736 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ITM2AO43736 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ITM2AO43736 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ITM2AO43736 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
ITM2AO43736 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.04■□□□□ 0.48
ITM2AO43736 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.04■□□□□ 0.48
ITM2AO43736 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.03■□□□□ 0.48
ITM2AO43736 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ITM2AO43736 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ITM2AO43736 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ITM2AO43736 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
ITM2AO43736 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.03■□□□□ 0.48
ITM2AO43736 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.03■□□□□ 0.48
ITM2AO43736 MIR564-202ENST00000385049 94 ntBASIC18.03■□□□□ 0.48
ITM2AO43736 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.03■□□□□ 0.48
ITM2AO43736 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
ITM2AO43736 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.03■□□□□ 0.48
ITM2AO43736 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
ITM2AO43736 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ITM2AO43736 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.03■□□□□ 0.48
ITM2AO43736 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.03■□□□□ 0.48
ITM2AO43736 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ITM2AO43736 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.03■□□□□ 0.48
ITM2AO43736 AC141586.5-201ENST00000624546 2050 ntBASIC18.03■□□□□ 0.48
ITM2AO43736 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ITM2AO43736 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ITM2AO43736 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
ITM2AO43736 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ITM2AO43736 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ITM2AO43736 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.03■□□□□ 0.48
ITM2AO43736 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ITM2AO43736 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ITM2AO43736 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.02■□□□□ 0.48
ITM2AO43736 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ITM2AO43736 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ITM2AO43736 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ITM2AO43736 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ITM2AO43736 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.02■□□□□ 0.48
ITM2AO43736 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ITM2AO43736 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ITM2AO43736 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
ITM2AO43736 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ITM2AO43736 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ITM2AO43736 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ITM2AO43736 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ITM2AO43736 AL355802.2-201ENST00000402069 882 ntBASIC18.02■□□□□ 0.48
ITM2AO43736 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.02■□□□□ 0.48
ITM2AO43736 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ITM2AO43736 AC133681.1-201ENST00000465482 601 ntBASIC18.02■□□□□ 0.48
ITM2AO43736 KRT8P50-201ENST00000562022 1438 ntBASIC18.02■□□□□ 0.48
ITM2AO43736 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ITM2AO43736 AC110285.5-201ENST00000611501 352 ntBASIC18.02■□□□□ 0.48
ITM2AO43736 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ITM2AO43736 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms