Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CEP290O15078 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CEP290O15078 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CEP290O15078 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CEP290O15078 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.83■□□□□ 0.77
CEP290O15078 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CEP290O15078 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.83■□□□□ 0.77
CEP290O15078 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CEP290O15078 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.83■□□□□ 0.76
CEP290O15078 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CEP290O15078 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CEP290O15078 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CEP290O15078 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CEP290O15078 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.83■□□□□ 0.76
CEP290O15078 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.83■□□□□ 0.76
CEP290O15078 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.83■□□□□ 0.76
CEP290O15078 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CEP290O15078 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.82■□□□□ 0.76
CEP290O15078 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CEP290O15078 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CEP290O15078 VN2R19P-201ENST00000442399 1052 ntBASIC19.82■□□□□ 0.76
CEP290O15078 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CEP290O15078 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.82■□□□□ 0.76
CEP290O15078 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.82■□□□□ 0.76
CEP290O15078 AL606495.2-201ENST00000605867 535 ntBASIC19.82■□□□□ 0.76
CEP290O15078 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.82■□□□□ 0.76
CEP290O15078 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CEP290O15078 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CEP290O15078 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.82■□□□□ 0.76
CEP290O15078 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CEP290O15078 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CEP290O15078 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.82■□□□□ 0.76
CEP290O15078 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.82■□□□□ 0.76
CEP290O15078 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CEP290O15078 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CEP290O15078 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CEP290O15078 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CEP290O15078 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CEP290O15078 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CEP290O15078 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CEP290O15078 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CEP290O15078 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CEP290O15078 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CEP290O15078 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
CEP290O15078 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.81■□□□□ 0.76
CEP290O15078 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.81■□□□□ 0.76
CEP290O15078 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.81■□□□□ 0.76
CEP290O15078 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.81■□□□□ 0.76
CEP290O15078 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CEP290O15078 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CEP290O15078 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CEP290O15078 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CEP290O15078 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.81■□□□□ 0.76
CEP290O15078 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.81■□□□□ 0.76
CEP290O15078 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.81■□□□□ 0.76
CEP290O15078 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CEP290O15078 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CEP290O15078 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CEP290O15078 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CEP290O15078 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CEP290O15078 AL512408.1-201ENST00000569378 2000 ntBASIC19.81■□□□□ 0.76
CEP290O15078 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.81■□□□□ 0.76
CEP290O15078 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.81■□□□□ 0.76
CEP290O15078 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CEP290O15078 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CEP290O15078 AC055876.3-201ENST00000431496 288 ntBASIC19.81■□□□□ 0.76
CEP290O15078 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.81■□□□□ 0.76
CEP290O15078 AC138649.4-201ENST00000612222 287 ntBASIC19.81■□□□□ 0.76
CEP290O15078 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.81■□□□□ 0.76
CEP290O15078 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CEP290O15078 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CEP290O15078 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CEP290O15078 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CEP290O15078 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CEP290O15078 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CEP290O15078 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.8■□□□□ 0.76
CEP290O15078 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CEP290O15078 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.8■□□□□ 0.76
CEP290O15078 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.8■□□□□ 0.76
CEP290O15078 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.8■□□□□ 0.76
CEP290O15078 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.8■□□□□ 0.76
CEP290O15078 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CEP290O15078 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CEP290O15078 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CEP290O15078 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.8■□□□□ 0.76
CEP290O15078 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.8■□□□□ 0.76
CEP290O15078 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CEP290O15078 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CEP290O15078 AC236430.1-201ENST00000402231 743 ntBASIC19.8■□□□□ 0.76
CEP290O15078 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CEP290O15078 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CEP290O15078 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.8■□□□□ 0.76
CEP290O15078 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.8■□□□□ 0.76
CEP290O15078 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.8■□□□□ 0.76
CEP290O15078 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CEP290O15078 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CEP290O15078 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CEP290O15078 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CEP290O15078 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CEP290O15078 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms