Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM38O00635 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM38O00635 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM38O00635 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TRIM38O00635 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM38O00635 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM38O00635 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM38O00635 AL133373.2-201ENST00000623187 2828 ntBASIC18.5■□□□□ 0.55
TRIM38O00635 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM38O00635 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM38O00635 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM38O00635 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TRIM38O00635 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM38O00635 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
TRIM38O00635 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM38O00635 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM38O00635 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM38O00635 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM38O00635 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
TRIM38O00635 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM38O00635 AL450487.1-201ENST00000426799 995 ntBASIC18.5■□□□□ 0.55
TRIM38O00635 TSPY23P-201ENST00000440136 739 ntBASIC18.5■□□□□ 0.55
TRIM38O00635 SPDYE13P-201ENST00000445314 798 ntBASIC18.5■□□□□ 0.55
TRIM38O00635 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM38O00635 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM38O00635 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.5■□□□□ 0.55
TRIM38O00635 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM38O00635 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM38O00635 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM38O00635 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM38O00635 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM38O00635 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM38O00635 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM38O00635 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM38O00635 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
TRIM38O00635 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM38O00635 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM38O00635 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM38O00635 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM38O00635 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM38O00635 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM38O00635 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM38O00635 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
TRIM38O00635 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 ZNF815P-204ENST00000434898 1737 ntBASIC18.49■□□□□ 0.55
TRIM38O00635 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM38O00635 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRIM38O00635 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM38O00635 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRIM38O00635 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM38O00635 NOC2LP1-202ENST00000452600 2235 ntBASIC18.49■□□□□ 0.55
TRIM38O00635 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 TPM4P1-201ENST00000436100 807 ntBASIC18.49■□□□□ 0.55
TRIM38O00635 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.49■□□□□ 0.55
TRIM38O00635 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.49■□□□□ 0.55
TRIM38O00635 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM38O00635 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRIM38O00635 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.49■□□□□ 0.55
TRIM38O00635 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.49■□□□□ 0.55
TRIM38O00635 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.49■□□□□ 0.55
TRIM38O00635 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM38O00635 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM38O00635 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.49■□□□□ 0.55
TRIM38O00635 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TRIM38O00635 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRIM38O00635 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM38O00635 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM38O00635 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM38O00635 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM38O00635 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRIM38O00635 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM38O00635 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM38O00635 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM38O00635 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM38O00635 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM38O00635 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM38O00635 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM38O00635 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM38O00635 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM38O00635 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM38O00635 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM38O00635 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM38O00635 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.48■□□□□ 0.55
TRIM38O00635 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms