Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CDC7O00311 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.05■□□□□ 0.48
CDC7O00311 GMCL1P1-201ENST00000463439 1581 ntBASIC18.05■□□□□ 0.48
CDC7O00311 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CDC7O00311 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 MMP23A-201ENST00000234610 1017 ntBASIC18.05■□□□□ 0.48
CDC7O00311 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.05■□□□□ 0.48
CDC7O00311 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CDC7O00311 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.05■□□□□ 0.48
CDC7O00311 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.05■□□□□ 0.48
CDC7O00311 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.05■□□□□ 0.48
CDC7O00311 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.05■□□□□ 0.48
CDC7O00311 NAPSB-206ENST00000562112 1266 ntBASIC18.05■□□□□ 0.48
CDC7O00311 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.05■□□□□ 0.48
CDC7O00311 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.05■□□□□ 0.48
CDC7O00311 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.05■□□□□ 0.48
CDC7O00311 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.05■□□□□ 0.48
CDC7O00311 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.05■□□□□ 0.48
CDC7O00311 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.05■□□□□ 0.48
CDC7O00311 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CDC7O00311 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.04■□□□□ 0.48
CDC7O00311 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDC7O00311 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CDC7O00311 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDC7O00311 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDC7O00311 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDC7O00311 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDC7O00311 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDC7O00311 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.04■□□□□ 0.48
CDC7O00311 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.04■□□□□ 0.48
CDC7O00311 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.04■□□□□ 0.48
CDC7O00311 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.04■□□□□ 0.48
CDC7O00311 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC7O00311 AC009102.3-201ENST00000623118 1491 ntBASIC18.04■□□□□ 0.48
CDC7O00311 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC7O00311 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC7O00311 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDC7O00311 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.04■□□□□ 0.48
CDC7O00311 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CDC7O00311 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDC7O00311 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC7O00311 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDC7O00311 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDC7O00311 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC7O00311 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDC7O00311 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC7O00311 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDC7O00311 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.03■□□□□ 0.48
CDC7O00311 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC7O00311 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CDC7O00311 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDC7O00311 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.03■□□□□ 0.48
CDC7O00311 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDC7O00311 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC7O00311 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDC7O00311 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CDC7O00311 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDC7O00311 AC026471.1-201ENST00000564629 3026 ntBASIC18.03■□□□□ 0.48
CDC7O00311 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CDC7O00311 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC7O00311 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CDC7O00311 MIR149-201ENST00000384879 89 ntBASIC18.03■□□□□ 0.48
CDC7O00311 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC7O00311 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.03■□□□□ 0.48
CDC7O00311 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDC7O00311 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.03■□□□□ 0.48
CDC7O00311 ECEL1P2-202ENST00000465689 757 ntBASIC18.03■□□□□ 0.48
CDC7O00311 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDC7O00311 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.03■□□□□ 0.48
CDC7O00311 AC066615.1-201ENST00000640911 628 ntBASIC18.03■□□□□ 0.48
CDC7O00311 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CDC7O00311 PHGDH-209ENST00000641074 1780 ntBASIC18.03■□□□□ 0.48
CDC7O00311 KRT8P7-201ENST00000533003 1432 ntBASIC18.03■□□□□ 0.48
CDC7O00311 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.03■□□□□ 0.48
CDC7O00311 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC7O00311 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.03■□□□□ 0.48
CDC7O00311 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CDC7O00311 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC7O00311 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC7O00311 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CDC7O00311 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.03■□□□□ 0.48
CDC7O00311 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms