Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.59■□□□□ 0.57
AP3B1O00203 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.59■□□□□ 0.57
AP3B1O00203 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.59■□□□□ 0.57
AP3B1O00203 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 AC138028.4-201ENST00000564984 1845 ntBASIC18.59■□□□□ 0.57
AP3B1O00203 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.59■□□□□ 0.57
AP3B1O00203 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.59■□□□□ 0.57
AP3B1O00203 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 AC112497.1-201ENST00000624824 639 ntBASIC18.59■□□□□ 0.57
AP3B1O00203 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.59■□□□□ 0.57
AP3B1O00203 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.59■□□□□ 0.57
AP3B1O00203 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 AC007613.1-201ENST00000572811 2597 ntBASIC18.59■□□□□ 0.57
AP3B1O00203 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 ESPNP-201ENST00000270691 2015 ntBASIC18.59■□□□□ 0.57
AP3B1O00203 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.59■□□□□ 0.57
AP3B1O00203 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
AP3B1O00203 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
AP3B1O00203 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
AP3B1O00203 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP3B1O00203 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
AP3B1O00203 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
AP3B1O00203 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP3B1O00203 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP3B1O00203 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
AP3B1O00203 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP3B1O00203 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.58■□□□□ 0.56
AP3B1O00203 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
AP3B1O00203 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
AP3B1O00203 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
AP3B1O00203 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.58■□□□□ 0.56
AP3B1O00203 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.58■□□□□ 0.56
AP3B1O00203 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.58■□□□□ 0.56
AP3B1O00203 AC104390.1-201ENST00000555663 520 ntBASIC18.58■□□□□ 0.56
AP3B1O00203 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.58■□□□□ 0.56
AP3B1O00203 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
AP3B1O00203 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP3B1O00203 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
AP3B1O00203 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.58■□□□□ 0.56
AP3B1O00203 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP3B1O00203 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP3B1O00203 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP3B1O00203 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.58■□□□□ 0.56
AP3B1O00203 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.58■□□□□ 0.56
AP3B1O00203 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP3B1O00203 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP3B1O00203 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.57■□□□□ 0.56
AP3B1O00203 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
AP3B1O00203 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.57■□□□□ 0.56
AP3B1O00203 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
AP3B1O00203 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.57■□□□□ 0.56
AP3B1O00203 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.57■□□□□ 0.56
AP3B1O00203 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.57■□□□□ 0.56
AP3B1O00203 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
AP3B1O00203 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.57■□□□□ 0.56
AP3B1O00203 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.57■□□□□ 0.56
AP3B1O00203 SNORA78-201ENST00000459373 127 ntBASIC18.57■□□□□ 0.56
AP3B1O00203 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.57■□□□□ 0.56
AP3B1O00203 MIR4497-201ENST00000583208 89 ntBASIC18.57■□□□□ 0.56
AP3B1O00203 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.57■□□□□ 0.56
AP3B1O00203 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
AP3B1O00203 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.57■□□□□ 0.56
AP3B1O00203 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 SDHAP2-201ENST00000455183 2001 ntBASIC18.57■□□□□ 0.56
AP3B1O00203 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.57■□□□□ 0.56
AP3B1O00203 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3B1O00203 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3B1O00203 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms