Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 AC008040.2-201ENST00000461049 708 ntBASIC16.78■□□□□ 0.28
CENPBD1B2RD01 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.78■□□□□ 0.28
CENPBD1B2RD01 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CENPBD1B2RD01 AP006294.2-201ENST00000641667 209 ntBASIC16.78■□□□□ 0.28
CENPBD1B2RD01 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.78■□□□□ 0.28
CENPBD1B2RD01 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CENPBD1B2RD01 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPBD1B2RD01 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CENPBD1B2RD01 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPBD1B2RD01 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CENPBD1B2RD01 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPBD1B2RD01 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CENPBD1B2RD01 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPBD1B2RD01 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPBD1B2RD01 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPBD1B2RD01 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 ANO7L1-203ENST00000602586 1720 ntBASIC16.77■□□□□ 0.28
CENPBD1B2RD01 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 PCDHA12-202ENST00000613593 2588 ntBASIC16.77■□□□□ 0.28
CENPBD1B2RD01 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.77■□□□□ 0.28
CENPBD1B2RD01 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CENPBD1B2RD01 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CENPBD1B2RD01 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CENPBD1B2RD01 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.77■□□□□ 0.27
CENPBD1B2RD01 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.77■□□□□ 0.27
CENPBD1B2RD01 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CENPBD1B2RD01 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.77■□□□□ 0.27
CENPBD1B2RD01 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CENPBD1B2RD01 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CENPBD1B2RD01 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CENPBD1B2RD01 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CENPBD1B2RD01 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.77■□□□□ 0.27
CENPBD1B2RD01 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 AL355355.2-201ENST00000442321 338 ntBASIC16.76■□□□□ 0.27
CENPBD1B2RD01 CA15P1-201ENST00000481698 905 ntBASIC16.76■□□□□ 0.27
CENPBD1B2RD01 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CENPBD1B2RD01 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CENPBD1B2RD01 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms