Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YJEFN3A6XGL0 IER3-202ENST00000376377 1350 ntBASIC19.15■□□□□ 0.66
YJEFN3A6XGL0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
YJEFN3A6XGL0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YJEFN3A6XGL0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
YJEFN3A6XGL0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
YJEFN3A6XGL0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 ESPNP-201ENST00000270691 2015 ntBASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 AP000550.4-202ENST00000639755 178 ntBASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
YJEFN3A6XGL0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 KRT18P48-201ENST00000434763 852 ntBASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 AC091076.1-201ENST00000610741 619 ntBASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 AC090164.3-201ENST00000610780 2143 ntBASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
YJEFN3A6XGL0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 GMCL1P1-201ENST00000463439 1581 ntBASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 AP003733.1-201ENST00000491725 852 ntBASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 AC011498.5-201ENST00000592027 486 ntBASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
YJEFN3A6XGL0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms