Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 ABHD17AP5-201ENST00000580133 923 ntBASIC17.11■□□□□ 0.33
CCDC160A6NGH7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC160A6NGH7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 AL121761.2-201ENST00000598007 1648 ntBASIC17.1■□□□□ 0.33
CCDC160A6NGH7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC160A6NGH7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 DOC2GP-204ENST00000639052 2548 ntBASIC17.09■□□□□ 0.33
CCDC160A6NGH7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 AC097381.1-201ENST00000429019 1296 ntBASIC17.09■□□□□ 0.33
CCDC160A6NGH7 AC239859.2-201ENST00000444165 318 ntBASIC17.09■□□□□ 0.33
CCDC160A6NGH7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 DUX4L19-201ENST00000557448 1267 ntBASIC17.09■□□□□ 0.33
CCDC160A6NGH7 AL356740.2-201ENST00000601559 647 ntBASIC17.09■□□□□ 0.33
CCDC160A6NGH7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCDC160A6NGH7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms