Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AL592071.1-201ENST00000611956 408 ntBASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 LINC00167-201ENST00000530583 1419 ntBASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 AC233702.3-201ENST00000578656 1387 ntBASIC18.3■□□□□ 0.52
TBC1D3FA6NER0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TBC1D3FA6NER0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 AC009102.3-201ENST00000623118 1491 ntBASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 TSPY19P-201ENST00000418461 509 ntBASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 TSPY18P-201ENST00000441642 509 ntBASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 IFNL4P1-201ENST00000607083 540 ntBASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 AC112777.1-201ENST00000540175 1423 ntBASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TBC1D3FA6NER0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 MYLKP1-201ENST00000509077 1580 ntBASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 RN7SL606P-201ENST00000472779 293 ntBASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 VENTXP7-201ENST00000475503 772 ntBASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 AC099336.1-202ENST00000602961 463 ntBASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 AC138894.3-201ENST00000603787 634 ntBASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 AC004263.2-201ENST00000617183 678 ntBASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3FA6NER0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TBC1D3FA6NER0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TBC1D3FA6NER0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms