Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.5■□□□□ 0.39
CNOT1A5YKK6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 AL139400.1-201ENST00000366220 510 ntBASIC17.49■□□□□ 0.39
CNOT1A5YKK6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 MTDHP4-201ENST00000600287 670 ntBASIC17.49■□□□□ 0.39
CNOT1A5YKK6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 AC004817.3-201ENST00000602957 2129 ntBASIC17.49■□□□□ 0.39
CNOT1A5YKK6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.49■□□□□ 0.39
CNOT1A5YKK6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 AC020907.5-201ENST00000624372 1936 ntBASIC17.48■□□□□ 0.39
CNOT1A5YKK6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 MKNK2P1-201ENST00000437526 628 ntBASIC17.48■□□□□ 0.39
CNOT1A5YKK6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CNOT1A5YKK6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 HCG4B-203ENST00000450128 991 ntBASIC17.47■□□□□ 0.39
CNOT1A5YKK6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 AC136632.2-201ENST00000512891 861 ntBASIC17.47■□□□□ 0.39
CNOT1A5YKK6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 AC011467.2-201ENST00000598425 242 ntBASIC17.47■□□□□ 0.39
CNOT1A5YKK6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms