Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 ABALON-201ENST00000629058 1903 ntBASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 SDHAP2-201ENST00000455183 2001 ntBASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 ECEL1P3-201ENST00000427961 737 ntBASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 AL512604.3-201ENST00000569583 964 ntBASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 AC133561.5-201ENST00000635547 218 ntBASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC162PA2VCL2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 AC093677.2-201ENST00000600169 1863 ntBASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 MIR149-201ENST00000384879 89 ntBASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 SLC25A3P1-201ENST00000443844 931 ntBASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 AC024243.1-201ENST00000609234 778 ntBASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 AC009102.3-201ENST00000623118 1491 ntBASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC162PA2VCL2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 SEC1P-202ENST00000473944 940 ntBASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 AC012306.2-201ENST00000609350 630 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms