Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 NCF1B-203ENST00000435988 1254 ntBASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
TRBV27A0A0K0K1C4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 AL138781.1-201ENST00000566567 1274 ntBASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 AL137784.2-201ENST00000607332 1000 ntBASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRBV27A0A0K0K1C4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms