Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 OR7E14P-202ENST00000530490 1290 ntBASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 SART3-203ENST00000546611 1184 ntBASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 AC040169.1-201ENST00000565382 521 ntBASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 AC055717.3-201ENST00000622967 595 ntBASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 AL139288.1-201ENST00000623748 933 ntBASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC163A0A0D9SF12 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC163A0A0D9SF12 MTMR9LP-203ENST00000426597 1545 ntBASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 GPX1P2-201ENST00000429271 606 ntBASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 RPS2P1-201ENST00000434010 821 ntBASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 KRT18P3-201ENST00000451602 1288 ntBASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 MIR3687-2-201ENST00000577708 61 ntBASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 MIR3687-1-201ENST00000614492 61 ntBASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC163A0A0D9SF12 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 PMS2P2-201ENST00000425039 1128 ntBASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 AP001160.2-201ENST00000596071 487 ntBASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 AC008735.5-201ENST00000623544 497 ntBASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC163A0A0D9SF12 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC163A0A0D9SF12 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms