Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 AC112907.2-201ENST00000448639 330 ntBASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 AL096828.2-201ENST00000567259 1965 ntBASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV5-4A0A0C4DH59 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 AL390961.4-201ENST00000623958 2535 ntBASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 AC113404.2-201ENST00000507884 177 ntBASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 LINC01238-205ENST00000567549 1107 ntBASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-4A0A0C4DH59 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 SPDYE13P-201ENST00000445314 798 ntBASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 AC024563.2-201ENST00000603282 481 ntBASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 AC083849.1-201ENST00000615227 514 ntBASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-4A0A0C4DH59 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 MIR662-201ENST00000384847 95 ntBASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms