Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV16A0A0A6YYK6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TRAV16A0A0A6YYK6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TRAV16A0A0A6YYK6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV16A0A0A6YYK6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV16A0A0A6YYK6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV16A0A0A6YYK6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TRAV16A0A0A6YYK6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 AC018553.1-201ENST00000616682 1458 ntBASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 AP006587.1-201ENST00000534129 1502 ntBASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 FLJ16779-201ENST00000612722 7638 ntBASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 AC004264.1-201ENST00000608354 794 ntBASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 AC134043.2-201ENST00000624206 2238 ntBASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV16A0A0A6YYK6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 SLC25A6P5-201ENST00000435663 894 ntBASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC12.84□□□□□ -0.35
TRAV16A0A0A6YYK6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms