Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 CCR12P-201ENST00000446203 998 ntBASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 C2orf69P3-201ENST00000565542 1120 ntBASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 MIR4497-201ENST00000583208 89 ntBASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 AC079598.2-202ENST00000546624 1451 ntBASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 SLC25A1P2-201ENST00000430693 912 ntBASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 AL355075.4-201ENST00000554988 638 ntBASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV1A0A0A0MS02 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 AC093827.2-201ENST00000512654 315 ntBASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 FITM1-202ENST00000559294 800 ntBASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 AC116562.4-202ENST00000641738 218 ntBASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 AC073592.3-201ENST00000625118 1834 ntBASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV1A0A0A0MS02 FER1L4-210ENST00000615531 5998 ntBASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms