Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 MIR4674-201ENST00000582457 87 ntBASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 AP001412.1-201ENST00000608405 714 ntBASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 KRT8P50-201ENST00000562022 1438 ntBASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV27A0A087WT01 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 AC036111.1-201ENST00000533973 1582 ntBASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 AP000593.1-201ENST00000393668 712 ntBASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 AC026471.5-201ENST00000615068 467 ntBASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV27A0A087WT01 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 CA15P1-201ENST00000481698 905 ntBASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV27A0A087WT01 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 AC138028.4-201ENST00000564984 1845 ntBASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms