Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
IGKV2-28A0A075B6P5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
IGKV2-28A0A075B6P5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
IGKV2-28A0A075B6P5 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
IGKV2-28A0A075B6P5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
IGKV2-28A0A075B6P5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
IGKV2-28A0A075B6P5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
IGKV2-28A0A075B6P5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.18□□□□□ -0.46
IGKV2-28A0A075B6P5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.18□□□□□ -0.46
IGKV2-28A0A075B6P5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
IGKV2-28A0A075B6P5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 MTMR9LP-203ENST00000426597 1545 ntBASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 MIR935-201ENST00000401179 91 ntBASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 AC097658.1-201ENST00000475555 843 ntBASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 MIR4758-201ENST00000577688 71 ntBASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IGKV2-28A0A075B6P5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 NFYC-AS1-201ENST00000606277 1687 ntBASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 TSPY21P-201ENST00000433481 731 ntBASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
IGKV2-28A0A075B6P5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms