Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX49Q9Y6V7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.11■■□□□ 1.13
DDX49Q9Y6V7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
DDX49Q9Y6V7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
DDX49Q9Y6V7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
DDX49Q9Y6V7 NTF6B-201ENST00000591913 560 ntBASIC22.11■■□□□ 1.13
DDX49Q9Y6V7 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.11■■□□□ 1.13
DDX49Q9Y6V7 DGCR10-201ENST00000609839 495 ntBASIC22.11■■□□□ 1.13
DDX49Q9Y6V7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.11■■□□□ 1.13
DDX49Q9Y6V7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX49Q9Y6V7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX49Q9Y6V7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX49Q9Y6V7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX49Q9Y6V7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
DDX49Q9Y6V7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 AC104417.2-201ENST00000562989 1793 ntBASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX49Q9Y6V7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 AC004951.3-201ENST00000418645 1148 ntBASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 MFAP1P1-201ENST00000442257 1255 ntBASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 EGLN1P1-201ENST00000531623 762 ntBASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 C2orf69P3-201ENST00000565542 1120 ntBASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
DDX49Q9Y6V7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 KRT8P8-201ENST00000434750 1448 ntBASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 AL590326.2-201ENST00000625139 305 ntBASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC22.08■■□□□ 1.13
DDX49Q9Y6V7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
DDX49Q9Y6V7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC22.08■■□□□ 1.12
DDX49Q9Y6V7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
DDX49Q9Y6V7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
DDX49Q9Y6V7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms