Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCH2Q9Y6C5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.72■□□□□ 0.91
PTCH2Q9Y6C5 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCH2Q9Y6C5 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCH2Q9Y6C5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.72■□□□□ 0.91
PTCH2Q9Y6C5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTCH2Q9Y6C5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.72■□□□□ 0.91
PTCH2Q9Y6C5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.72■□□□□ 0.91
PTCH2Q9Y6C5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTCH2Q9Y6C5 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.72■□□□□ 0.91
PTCH2Q9Y6C5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTCH2Q9Y6C5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PTCH2Q9Y6C5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.72■□□□□ 0.91
PTCH2Q9Y6C5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PTCH2Q9Y6C5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.72■□□□□ 0.91
PTCH2Q9Y6C5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 AL357033.4-201ENST00000617703 1807 ntBASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 AC011467.2-201ENST00000598425 242 ntBASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCH2Q9Y6C5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.91
PTCH2Q9Y6C5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 AC068472.1-201ENST00000474589 881 ntBASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
PTCH2Q9Y6C5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 AC009947.1-201ENST00000444350 727 ntBASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 AL138831.2-201ENST00000606564 490 ntBASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms