Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 AC009065.1-201ENST00000564055 1225 ntBASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 AL445228.2-201ENST00000605589 952 ntBASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 AC009113.1-201ENST00000570267 2443 ntBASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 AL671277.2-201ENST00000458060 996 ntBASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 AL391807.1-203ENST00000604392 2365 ntBASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 LINC01311-201ENST00000565162 1445 ntBASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGC4Q9Y5F7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 PVRIG2P-201ENST00000435460 978 ntBASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGC4Q9Y5F7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGC4Q9Y5F7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGC4Q9Y5F7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDHGC4Q9Y5F7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGC4Q9Y5F7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGC4Q9Y5F7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGC4Q9Y5F7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGC4Q9Y5F7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGC4Q9Y5F7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGC4Q9Y5F7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGC4Q9Y5F7 ARMC10P1-201ENST00000313754 855 ntBASIC18.54■□□□□ 0.56
PCDHGC4Q9Y5F7 HBZP1-201ENST00000354915 429 ntBASIC18.54■□□□□ 0.56
PCDHGC4Q9Y5F7 AL031133.1-201ENST00000406807 723 ntBASIC18.54■□□□□ 0.56
PCDHGC4Q9Y5F7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGC4Q9Y5F7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGC4Q9Y5F7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDHGC4Q9Y5F7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms