Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 AL136038.3-201ENST00000561909 1096 ntBASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 MYLKP1-201ENST00000509077 1580 ntBASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 AC009113.1-201ENST00000570267 2443 ntBASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB1Q9Y5F3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB1Q9Y5F3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.39■□□□□ 0.54
PCDHB1Q9Y5F3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 AC036111.1-201ENST00000533973 1582 ntBASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 KRT8P7-201ENST00000533003 1432 ntBASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB1Q9Y5F3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 ZNF444P1-201ENST00000559497 298 ntBASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 CR769767.2-201ENST00000622735 460 ntBASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms