Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB3Q9Y5E6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB3Q9Y5E6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB3Q9Y5E6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB3Q9Y5E6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB3Q9Y5E6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB3Q9Y5E6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB3Q9Y5E6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB3Q9Y5E6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB3Q9Y5E6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 NEK4P2-201ENST00000580004 1012 ntBASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB3Q9Y5E6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 AL121956.5-201ENST00000625261 221 ntBASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB3Q9Y5E6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB3Q9Y5E6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB3Q9Y5E6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB3Q9Y5E6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
PCDHB3Q9Y5E6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.02■□□□□ 0.47
PCDHB3Q9Y5E6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB3Q9Y5E6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
PCDHB3Q9Y5E6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PCDHB3Q9Y5E6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PCDHB3Q9Y5E6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.02■□□□□ 0.47
PCDHB3Q9Y5E6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.02■□□□□ 0.47
PCDHB3Q9Y5E6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB3Q9Y5E6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms