Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 AC099343.3-201ENST00000605834 2503 ntBASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 KRT18P41-201ENST00000518924 1277 ntBASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 AC134043.2-201ENST00000624206 2238 ntBASIC18.76■□□□□ 0.59
CHMP2BQ9UQN3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 FAM197Y1-201ENST00000421178 764 ntBASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP2BQ9UQN3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 GPAT2P1-201ENST00000444924 1672 ntBASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 FSCN1P1-201ENST00000568912 1481 ntBASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 AL023284.2-201ENST00000405850 579 ntBASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 AP000692.2-201ENST00000608391 879 ntBASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 FAM197Y4-202ENST00000622692 608 ntBASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.74■□□□□ 0.59
CHMP2BQ9UQN3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 AL359736.2-201ENST00000621992 437 ntBASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms