Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 AL645929.1-201ENST00000420084 975 ntBASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 CLEC4GP1-201ENST00000596555 870 ntBASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 SPDYE13P-201ENST00000445314 798 ntBASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.98■□□□□ 0.31
NPIPA1Q9UND3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 DUSP5P1-201ENST00000441325 1139 ntBASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.97■□□□□ 0.31
NPIPA1Q9UND3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA1Q9UND3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.96■□□□□ 0.31
NPIPA1Q9UND3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA1Q9UND3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.96■□□□□ 0.31
NPIPA1Q9UND3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA1Q9UND3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NPIPA1Q9UND3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA1Q9UND3 CROCCP3-202ENST00000420820 1947 ntBASIC16.96■□□□□ 0.31
NPIPA1Q9UND3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA1Q9UND3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA1Q9UND3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA1Q9UND3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA1Q9UND3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.96■□□□□ 0.31
NPIPA1Q9UND3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
NPIPA1Q9UND3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms