Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 AL671277.2-201ENST00000458060 996 ntBASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 SEC1P-202ENST00000473944 940 ntBASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 AC007613.1-201ENST00000572811 2597 ntBASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 AC112907.2-201ENST00000448639 330 ntBASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF3C4Q9UKN8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 KRT18P23-201ENST00000435622 1283 ntBASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF3C4Q9UKN8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 AC112777.1-201ENST00000540175 1423 ntBASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms