Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSFQ9UBX1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 AC005332.3-201ENST00000589904 676 ntBASIC17.3■□□□□ 0.36
CTSFQ9UBX1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CTSFQ9UBX1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 MYLKP1-201ENST00000509077 1580 ntBASIC17.29■□□□□ 0.36
CTSFQ9UBX1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 KRT18P48-201ENST00000434763 852 ntBASIC17.29■□□□□ 0.36
CTSFQ9UBX1 AP002383.4-201ENST00000442518 975 ntBASIC17.29■□□□□ 0.36
CTSFQ9UBX1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSFQ9UBX1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 MIR149-201ENST00000384879 89 ntBASIC17.28■□□□□ 0.36
CTSFQ9UBX1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 AP002414.4-201ENST00000589764 1148 ntBASIC17.28■□□□□ 0.36
CTSFQ9UBX1 CLEC4GP1-201ENST00000596555 870 ntBASIC17.28■□□□□ 0.36
CTSFQ9UBX1 AC024563.2-201ENST00000603282 481 ntBASIC17.28■□□□□ 0.36
CTSFQ9UBX1 AL390719.2-201ENST00000606993 987 ntBASIC17.28■□□□□ 0.36
CTSFQ9UBX1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 AC112777.1-201ENST00000540175 1423 ntBASIC17.28■□□□□ 0.36
CTSFQ9UBX1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTSFQ9UBX1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms