Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 TUBB8P6-201ENST00000436895 1288 ntBASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 TSPY23P-201ENST00000440136 739 ntBASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 AC005181.1-201ENST00000604782 1256 ntBASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 AC018695.7-201ENST00000624587 2492 ntBASIC16.21■□□□□ 0.18
COMMD3Q9UBI1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
COMMD3Q9UBI1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
COMMD3Q9UBI1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
COMMD3Q9UBI1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
COMMD3Q9UBI1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.21■□□□□ 0.18
COMMD3Q9UBI1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
COMMD3Q9UBI1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 LSM12P1-201ENST00000411836 588 ntBASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 RPS2P52-201ENST00000469610 820 ntBASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 KRT18P16-201ENST00000510337 1294 ntBASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 AC005829.2-201ENST00000571422 1056 ntBASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 AL139246.5-201ENST00000606645 996 ntBASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COMMD3Q9UBI1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 AC008556.1-201ENST00000610908 2040 ntBASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 AC073210.2-201ENST00000430369 194 ntBASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 DUX4L16-201ENST00000555130 1264 ntBASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 AC068587.9-201ENST00000641814 219 ntBASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD3Q9UBI1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms