Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 FAAHP1-202ENST00000446499 1238 ntBASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 RN7SL606P-201ENST00000472779 293 ntBASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRIT1Q9P2V4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.77■□□□□ 0.43
LRIT1Q9P2V4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRIT1Q9P2V4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 MIR149-201ENST00000384879 89 ntBASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 AC246785.2-201ENST00000432512 513 ntBASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 KRT18P31-201ENST00000506277 1292 ntBASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRIT1Q9P2V4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 KRT17P6-201ENST00000453795 1220 ntBASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 EMBP1-201ENST00000458200 901 ntBASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 VENTXP7-201ENST00000475503 772 ntBASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 AC099336.1-202ENST00000602961 463 ntBASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 AC138894.3-201ENST00000603787 634 ntBASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.75■□□□□ 0.43
LRIT1Q9P2V4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 AC004263.2-201ENST00000617183 678 ntBASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRIT1Q9P2V4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms