Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.45■□□□□ 0.7
CHD7Q9P2D1 KRT18P28-201ENST00000453838 1332 ntBASIC19.44■□□□□ 0.7
CHD7Q9P2D1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 AL356309.3-201ENST00000624132 1934 ntBASIC19.44■□□□□ 0.7
CHD7Q9P2D1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 AC009947.1-201ENST00000444350 727 ntBASIC19.44■□□□□ 0.7
CHD7Q9P2D1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.44■□□□□ 0.7
CHD7Q9P2D1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 FP475955.4-201ENST00000623131 1990 ntBASIC19.43■□□□□ 0.7
CHD7Q9P2D1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 AC007952.6-201ENST00000573168 2673 ntBASIC19.43■□□□□ 0.7
CHD7Q9P2D1 AC003957.1-201ENST00000625108 2673 ntBASIC19.43■□□□□ 0.7
CHD7Q9P2D1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 AL158211.5-201ENST00000623583 2518 ntBASIC19.43■□□□□ 0.7
CHD7Q9P2D1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.43■□□□□ 0.7
CHD7Q9P2D1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms