Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 KRT18P35-201ENST00000510488 1269 ntBASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 AL355075.4-201ENST00000554988 638 ntBASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 AC012306.2-201ENST00000609350 630 ntBASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 AC113410.3-201ENST00000623366 203 ntBASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 REXO1L9P-201ENST00000604264 2108 ntBASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 AC133681.1-201ENST00000465482 601 ntBASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
CCM2LQ9NUG4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCM2LQ9NUG4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCM2LQ9NUG4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CCM2LQ9NUG4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CCM2LQ9NUG4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCM2LQ9NUG4 FLJ13224-201ENST00000313737 1514 ntBASIC17.52■□□□□ 0.39
CCM2LQ9NUG4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
CCM2LQ9NUG4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
CCM2LQ9NUG4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
CCM2LQ9NUG4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.52■□□□□ 0.39
CCM2LQ9NUG4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CCM2LQ9NUG4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 KRT8P45-201ENST00000414328 1447 ntBASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 AC110285.5-201ENST00000611501 352 ntBASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2LQ9NUG4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms