Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 BICD1-207ENST00000551848 1962 ntBASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 AL024508.2-201ENST00000607749 1894 ntBASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 AL162741.1-201ENST00000565563 1558 ntBASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ECHDC1Q9NTX5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 NEFHP1-201ENST00000412845 2629 ntBASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 LINC01126-201ENST00000623515 1646 ntBASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 AC092597.1-201ENST00000487352 616 ntBASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 HYMAI.1-201ENST00000620949 238 ntBASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 AC135776.1-201ENST00000319817 2481 ntBASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 AL391807.1-203ENST00000604392 2365 ntBASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
ECHDC1Q9NTX5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
ECHDC1Q9NTX5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ECHDC1Q9NTX5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.18
ECHDC1Q9NTX5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ECHDC1Q9NTX5 AC093677.2-201ENST00000600169 1863 ntBASIC22.39■■□□□ 1.18
ECHDC1Q9NTX5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
ECHDC1Q9NTX5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 AL136038.4-201ENST00000603606 1261 ntBASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ECHDC1Q9NTX5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 AC112907.2-201ENST00000448639 330 ntBASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ECHDC1Q9NTX5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 AC135050.7-201ENST00000624508 2218 ntBASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms