Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 AC009065.1-201ENST00000564055 1225 ntBASIC18.36■□□□□ 0.53
TREX1Q9NSU2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 AL512604.3-201ENST00000569583 964 ntBASIC18.36■□□□□ 0.53
TREX1Q9NSU2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 NEK4P2-201ENST00000580004 1012 ntBASIC18.36■□□□□ 0.53
TREX1Q9NSU2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TREX1Q9NSU2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 AL024508.2-201ENST00000607749 1894 ntBASIC18.35■□□□□ 0.53
TREX1Q9NSU2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 AC087499.1-201ENST00000418141 1075 ntBASIC18.35■□□□□ 0.53
TREX1Q9NSU2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TREX1Q9NSU2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 FLJ13224-201ENST00000313737 1514 ntBASIC18.34■□□□□ 0.53
TREX1Q9NSU2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 KRT18P22-201ENST00000402024 1347 ntBASIC18.34■□□□□ 0.53
TREX1Q9NSU2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 ECEL1P3-201ENST00000427961 737 ntBASIC18.34■□□□□ 0.53
TREX1Q9NSU2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 AC145285.6-201ENST00000604632 637 ntBASIC18.34■□□□□ 0.53
TREX1Q9NSU2 AC024243.1-201ENST00000609234 778 ntBASIC18.34■□□□□ 0.53
TREX1Q9NSU2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TREX1Q9NSU2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TREX1Q9NSU2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TREX1Q9NSU2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TREX1Q9NSU2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.33■□□□□ 0.52
TREX1Q9NSU2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.33■□□□□ 0.52
TREX1Q9NSU2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms