Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 AC036111.1-201ENST00000533973 1582 ntBASIC17.11■□□□□ 0.33
POLE3Q9NRF9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 AL390955.1-201ENST00000428694 934 ntBASIC17.11■□□□□ 0.33
POLE3Q9NRF9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 AC007663.1-201ENST00000438948 1240 ntBASIC17.11■□□□□ 0.33
POLE3Q9NRF9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 AC128688.1-201ENST00000487626 519 ntBASIC17.11■□□□□ 0.33
POLE3Q9NRF9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 ABALON-201ENST00000629058 1903 ntBASIC17.11■□□□□ 0.33
POLE3Q9NRF9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.11■□□□□ 0.33
POLE3Q9NRF9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 AL390961.4-201ENST00000623958 2535 ntBASIC17.1■□□□□ 0.33
POLE3Q9NRF9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 AC009065.1-201ENST00000564055 1225 ntBASIC17.1■□□□□ 0.33
POLE3Q9NRF9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 CR769767.2-201ENST00000622735 460 ntBASIC17.1■□□□□ 0.33
POLE3Q9NRF9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLE3Q9NRF9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 AC026471.1-201ENST00000564629 3026 ntBASIC17.09■□□□□ 0.33
POLE3Q9NRF9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLE3Q9NRF9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.08■□□□□ 0.33
POLE3Q9NRF9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
POLE3Q9NRF9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.08■□□□□ 0.33
POLE3Q9NRF9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
POLE3Q9NRF9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
POLE3Q9NRF9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
POLE3Q9NRF9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
POLE3Q9NRF9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
POLE3Q9NRF9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
POLE3Q9NRF9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
POLE3Q9NRF9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
POLE3Q9NRF9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.08■□□□□ 0.32
POLE3Q9NRF9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.08■□□□□ 0.32
POLE3Q9NRF9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLE3Q9NRF9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms