Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 KRT8P26-201ENST00000534154 1276 ntBASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 AC024243.1-201ENST00000609234 778 ntBASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ARHGEF3Q9NR81 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 AL022342.1-201ENST00000400363 863 ntBASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 CHCHD2P8-201ENST00000429873 447 ntBASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 AC006538.3-201ENST00000612495 578 ntBASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF3Q9NR81 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 EMBP1-201ENST00000458200 901 ntBASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 AL031008.1-201ENST00000619963 541 ntBASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
ARHGEF3Q9NR81 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF3Q9NR81 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF3Q9NR81 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF3Q9NR81 AL162741.1-201ENST00000565563 1558 ntBASIC19.41■□□□□ 0.7
ARHGEF3Q9NR81 AC093525.10-201ENST00000625130 1569 ntBASIC19.41■□□□□ 0.7
ARHGEF3Q9NR81 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
ARHGEF3Q9NR81 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms